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Picard2.27.2 by Sourceforge |
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Software Description:
Picard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported. ...
type: Open Source
Download Picardcategories: Sequence Alignment Map, bioinformatics tool, BAM manipulation, sequence, bioinformatics, manipulate Add to Download Basket Report virus or spyware |
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| Software Info | |
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Best Vista Download periodically updates pricing and software information of Picard full version from the publisher,
but some information may be out-of-date. You should confirm all information. Software piracy is theft, using crack, warez passwords, patches, serial numbers, registration codes, key generator, keymaker or keygen for Picard license key is illegal and prevent future development of Picard. Download links are directly from our mirrors or publisher's website, Picard torrent files or shared files from rapidshare, yousendit or megaupload are not allowed! |
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| Released: | May 25, 2022 |
| Filesize: | 16.60 MB |
| Platform: | Windows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64, Windows 8, Windows 8 x64, Windows 10, Windows 10 x64, Windows 11 |
| Install | Instal And Uninstall |
| Add Your Review or Windows Vista Compatibility Report |
Picard- Releases History |
| Software: | Picard 2.27.2 |
| Date Released: | May 25, 2022 |
| Status: | New Release |
| Software: | Picard 2.20.7 |
| Date Released: | Sep 16, 2019 |
| Status: | New Release |
| Release Notes: | Initial Move Calculate the detail metric correctly (on a per-genotype basis). Add more tests Add test to handle multi-sample VCF Refactor detail->summary metrics accumulation. Fix CreateVerifyIDIntensityContaminationMetricsFile to handle LLK and LLK0 as doubles. Added new metric, refined naming of others. Enhanced multiple sample tests. Updating gradle to 5.6 (#1380) Updating NIO dependency and fixing a dependency issue (#1391) Update to htsjdk 2.20.3 (#1381) Extend travis build matrix to separate Barclay tests from legacy tests. (#952) PO-18867 Catch NaN Percent_Duplication edge case (#1389) |
| Software: | Picard 1.119 |
| Date Released: | Sep 2, 2014 |
| Status: | New Release |
| Release Notes: | Updated AbstractOpticalDuplicateFinder to handle post-CASAVA 1.8 read names. Pass READ_NAME_REGEX=null to skip optical duplicate detection in MarkDuplicates. Fixed RevertSam to harmonize different quality score encoding schemes when the sanitize option is set. Modified Casava18ReadNameEncoder to correctly display filter status. SamPairUtil: Added the ability to set the mate cigar tag on supplementary alignments. Updated AbstractAlignmentMerger to set mate cigars when merging supplementary alignments. CollectWgsMetrics: Added 2 new metrics- the fraction of bases attaining 15X and 25X coverage respectively. Added a new tool, CollectBaseDistributionByCycle, that computes the nucleotide distribution per cycle. FileAppendStreamLRUCache: Added wrapping of FileOutputStreams with BufferedOutputStreams. Fixed a bug in BCF2Writer where it was double-closing the output stream. Fixed VariantContext to ignore symbolic alleles when running strict validation for a VCF. |
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... of Sweet Home 3D with plug-ins programmed in Java, or by developing a derived version based on its Model View Controller architecture. Choose the language displayed in the user ...
type: Open Source
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Cytoscape is an open source bioinformatics software platform for visualizing molecular interaction networks ... anyone using the Cytoscape open API based on Java™ technology and plugin community development is encouraged. Most
type: Open Source
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categories: molecular interaction network, molecule visualization, bioinformatics viewer, visualization, molecule, Biology |
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Cytoscape x64 3.10.0 download by Cytoscape Consortium
Cytoscape x64 is an open source bioinformatics software platform for visualizing molecular interaction networks ... anyone using the Cytoscape open API based on Java™ technology and plugin community development is encouraged. Most ...
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Jmol 14.31.53 download by Egon Willighagen
Jmol is an applet and Java based application designed to display various 3D chemical ... plug-in. · The Jmol application is a standalone Java application that runs on the desktop. · The ...
type: Open Source
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categories: quantum chemistry, 3D viewer, 3D chemical information, chemistry, chemical |
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... design and performance management. ASDN software is Open Source and developed by University of Vaasa, Finland and ABB Operations Development Group. ...
type: Open Source
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categories: design logistics networks, analyze logistics networks, develop logistics networks, create, design, analyze |
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Graph Streaming 0.7.0.12 download by André Panisson
... and another very interesting experience is the GraphStream Java Library. It is composed of an API that gives a way to add edges and nodes in a graph and make ...
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... known as TrekBuddy Atlas Creator) is an open source (GPL) program which creates offline atlases for GPS ... image with calibration MAP file for OziExplorer. As source for an offline atlas Mobile Atlas Creator can ...
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type: Freeware
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categories: analyze structural property, design metrics, establish benchmark, analyzer, analyze, measurement |
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... 7), Mac OS X, and Linux, provided that Java (Version 5 or higher) is installed and enabled. ... energy simulations. Your simulations can be deployed as Java applets that run within a browser or—in the ...
type: Open Source
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categories: heat flow simulation, simulate mass flow, analyze heat flow, simulate, simulator, simulation |
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MZmine 2 is an open-source project delivering a software for mass-spectrometry data processing, with the main focus on LC-MS data. It is based on the original MZmine toolbox described in 2006 ...
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categories: analyze mass spectrometry data, mass spectrometry data analyzer, compile raw data, analysis, analyze, analyzer |
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