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Picard2.27.2 by Sourceforge |
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Software Description:
Picard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported. ...
type: Open Source
Download Picardcategories: Sequence Alignment Map, bioinformatics tool, BAM manipulation, sequence, bioinformatics, manipulate Add to Download Basket Report virus or spyware |
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| Software Info | |
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Best Vista Download periodically updates pricing and software information of Picard full version from the publisher,
but some information may be out-of-date. You should confirm all information. Software piracy is theft, using crack, warez passwords, patches, serial numbers, registration codes, key generator, keymaker or keygen for Picard license key is illegal and prevent future development of Picard. Download links are directly from our mirrors or publisher's website, Picard torrent files or shared files from rapidshare, yousendit or megaupload are not allowed! |
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| Released: | May 25, 2022 |
| Filesize: | 16.60 MB |
| Platform: | Windows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64, Windows 8, Windows 8 x64, Windows 10, Windows 10 x64, Windows 11 |
| Install | Instal And Uninstall |
| Add Your Review or Windows Vista Compatibility Report |
Picard- Releases History |
| Software: | Picard 2.27.2 |
| Date Released: | May 25, 2022 |
| Status: | New Release |
| Software: | Picard 2.20.7 |
| Date Released: | Sep 16, 2019 |
| Status: | New Release |
| Release Notes: | Initial Move Calculate the detail metric correctly (on a per-genotype basis). Add more tests Add test to handle multi-sample VCF Refactor detail->summary metrics accumulation. Fix CreateVerifyIDIntensityContaminationMetricsFile to handle LLK and LLK0 as doubles. Added new metric, refined naming of others. Enhanced multiple sample tests. Updating gradle to 5.6 (#1380) Updating NIO dependency and fixing a dependency issue (#1391) Update to htsjdk 2.20.3 (#1381) Extend travis build matrix to separate Barclay tests from legacy tests. (#952) PO-18867 Catch NaN Percent_Duplication edge case (#1389) |
| Software: | Picard 1.119 |
| Date Released: | Sep 2, 2014 |
| Status: | New Release |
| Release Notes: | Updated AbstractOpticalDuplicateFinder to handle post-CASAVA 1.8 read names. Pass READ_NAME_REGEX=null to skip optical duplicate detection in MarkDuplicates. Fixed RevertSam to harmonize different quality score encoding schemes when the sanitize option is set. Modified Casava18ReadNameEncoder to correctly display filter status. SamPairUtil: Added the ability to set the mate cigar tag on supplementary alignments. Updated AbstractAlignmentMerger to set mate cigars when merging supplementary alignments. CollectWgsMetrics: Added 2 new metrics- the fraction of bases attaining 15X and 25X coverage respectively. Added a new tool, CollectBaseDistributionByCycle, that computes the nucleotide distribution per cycle. FileAppendStreamLRUCache: Added wrapping of FileOutputStreams with BufferedOutputStreams. Fixed a bug in BCF2Writer where it was double-closing the output stream. Fixed VariantContext to ignore symbolic alleles when running strict validation for a VCF. |
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TinyCAD 3.00.04 download by Tinycad.sourceforge.net
... netlist of your circuit. TinyCAD is fully open-source so you can use it for free and you can download the source code for use in your own projects. ... not familar with PNG files, they are the open-source equivilent of GIFs. All modern web browsers and ...
type: Open Source
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categories: JPEG, PNG, BMP or EMF, geometry editor, Constructive, Geometry, Tiny CAD |
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... another very interesting experience is the GraphStream Java Library. It is composed of an API that gives ... this demo is a part of the Amazon.com library, where the nodes represent books and the edges ...
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FidoCadJ 0.24.7 download by Davide Bucci
... a very easy to use editor, with a library of electrical symbols and footprints (through hole and SMD). Albeit its ease of use, it is a very immediate and effective ...
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categories: design electronic circuit, generate electronic circuit, create schematics, generate, generator, design |
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SCaVis 2.3 download by Dr. Sergei Chekanov
... scientists, engineers and students. The program incorporates many open-source software packages into a coherent interface using the ... classes and methods are packed in 50 MB library pack (this excludes those from the native Java ...
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categories: data-analysis framework, data manipulation, data plotting, analyze, analysis, analyzer |
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... written in C++, using Qt as the graphics library. It has been compiled successfully on GNU/Linux, MacOS/X and Windows platforms. ...
type: Open Source
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categories: sail design, design sail, develop sail, design, develop, development, SailcutCAD |
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Msieve 1.53 download by jasonp_sf
Msieve is a C library implementing a suite of algorithms to factor large integers. It contains an implementation of the SIQS and GNFS algorithms; the latter has helped complete some ...
type: Open Source
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categories: marthematical library, implement algorithm, GNFS algorithm, math, mathematical, implement |
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Integrated Genome Browser 7.0.4 B15225 download by Integrated Genome Browser Team
... run on any computer. IGB is an open source, publicly-funded project, but it did not start out ... which donated the IGB software and its foundation library the Genoviz SDK to the community in 2004. ...
type: Freeware
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categories: view microarray design, microarray design viewer, explore genome-scale data, visualization, view, viewer |
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MuniWin 2.1.13 download by David Motl
... and master-flat correction frames · Static or shared library with an extensive set of functions, that can be called using simple application programming interface · A complete set of commands ...
type: Open Source
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categories: image reduction, astrophotometry tool, CCD camera, reduce, reduction, astrophotometry |
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Ocapy 0.402 download by Didier Gosseau
... Python. Runs under Windows 2000, XP, Vista, Seven. Open source software. · Implement RPN (Reverse Polish Notation) like ... on real and complex numbers, implementing the MpMath library. ...
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categories: science calculator, engineer calculator, math calculator, calculator, calculation, calculate |
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jHepWork 3.9 download by Dr. Sergei Chekanov
... scientists, engineers and students. The program incorporates many open-source math software packages into a coherent interface using ... classes and methods are packed in 50 MB library pack (this excludes those from the native Java ...
type: Freeware
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categories: data-analysis framework, data manipulation, data plotting, analyze, analysis, analyzer |
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