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Navigation: Home \ Education \ Science \ Staden

Staden

 2.0.0b11   by Rodger Staden

Vista Compatible
Software Description:
A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools ... and MS Windows.

Features:
Sequence assembly (gap4/gap5)
DNA/Protein analysis (spin)
Sequence alignment
Genome viewer


replaces the old Sort By Sequence mode as well as generating lists
of ... with one another). It auto-detects likely
adapter sequences to avoid extending these.

It ... additional depadded option to use original
reference sequence coordinates. Note this isn't 100% robust as it
type: Open Source
categories: DNA, Gap4, Gap5, Spin, trev, ancillary tools, Staden Package Download Staden


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Software Info
Best Vista Download periodically updates pricing and software information of Staden full version from the publisher, but some information may be out-of-date. You should confirm all information.
Software piracy is theft, using crack, warez passwords, patches, serial numbers, registration codes, key generator, keymaker or keygen for Staden license key is illegal and prevent future development of Staden. Download links are directly from our mirrors or publisher's website, Staden torrent files or shared files from rapidshare, yousendit or megaupload are not allowed!
Released: April 25, 2016
Filesize: 20.10 MB
Platform: Windows 2000, Windows 2003, Windows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64, Windows 8, Windows 8 x64, Windows 10, Windows 10 x64, Linux, Mac OS X
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Staden

- Releases History
Software: Staden 2.0.0b11
Date Released: Apr 25, 2016
Status: New Release
Software: Staden 2.0.0b9
Date Released: Dec 5, 2011
Status: New Release
Software: Staden 2.0.0b8
Date Released: Feb 10, 2011
Status: New Release
Release Notes: * Various fixes to compilation: parallel makes, improved DESTDIR
support.
* Big tidy up on the cache refence counting system, fixing
multiple sporadic crashes and rarely even data corruptions.
* Fixes to consensus caching sometimes storing corrupted data.
* More robust when we run out of disc space.
* Import GFF should be more robust. This now also supports
"colour=<0-17>" tags to match those used in Artemis.
* The insert size in the Libraries panel is now displayed
correctly (when filled out) instead of at 1/100th of the size.
* Reduced excessive memory usage of tg_index -t on large data
sets. Also fixed a few memory leaks and reference count leaks
(appear like memory leaks).
* SAM export now works correctly when auxillary fields or
read-group data is present.
* Removed a small memory corruption when shutting down
plots. This sometimes caused crashes when quitting the contig
editor.
* Fixed occasional crash when joining contigs.
* Editor searching crash fixes.


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Staden 2.0.0b11 download by Rodger Staden
A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools ... Unix, Linux, MacOSX and MS Windows. Features: Sequence assembly (gap4/gap5) DNA/Protein analysis (spin) Sequence alignment Genome ...
type: Open Source
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